Insertion junction: CLIP2.042696_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.042696
Chromosome:chromosome 12
Location:6445197
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g537450 COX13 (1 of 1) IPR001349 - Cytochrome c oxidase, subunit VIa; Mitochondrial cytochrome c oxidase 12 kDa subunit intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCAAGCGGATCCCAGCGCTCACCGAGCAGCATGAAGCCGACCATCTCCT
Internal bar code:GCTCGCATCTTTCTAGCTAACA

Confirmation - LEAP-Seq

LEAP-Seq distance:1005
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CCCCAAAGCTTCGTGGAGAT
Suggested primer 2:AGATGCAGGTGTAGGTGTGC