Insertion junction: CLIP2.042698_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.042698
Chromosome:chromosome 14
Location:98343
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g801591 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGGAGGCAAGTGGCTGTAAATTGTACGGTCGCTTGAGTAACGAGTACCG
Internal bar code:TGTGTTTGGAATCCCGAAGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2675
LEAP-Seq percent confirming:55.2632
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:GTGCTACTGGTCCACGAACA
Suggested primer 2:AACTGCTGCTGCCACCTTAT