Insertion junction: CLIP2.042708_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.042708
Chromosome:chromosome 16
Location:4826001
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00094023

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGATGTTTCGAATGCAGCGTCCAGCGCGCTGGCGGACGACTCACCCAACC
Internal bar code:CGGCTGGGGGATCTGAAAAAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1145
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:GCCTTCAGCTCTCTGGACAT
Suggested primer 2:ACGAACACAATCGCGCAAAA