Insertion junction: CLIP2.042712_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.042712
Chromosome:chromosome 11
Location:388749
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467581 (1 of 1) PTHR10071:SF177 - GATA-LIKE TRANSCRIPTION FACTOR ELT-6 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCTCAGCAACCCTCTGCAGCCCCCCGCCCCGCAAGCCCTTGCCCACCTT
Internal bar code:ATTAAGGACGTTGCTCGAATTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2032
LEAP-Seq percent confirming:93.3333
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:TCCACCACATACCTGCAACC
Suggested primer 2:ATGCTTTGCCTCATCGAGCT