Insertion junction: CLIP2.042712_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.042712
Chromosome:chromosome 11
Location:388763
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467581 (1 of 1) PTHR10071:SF177 - GATA-LIKE TRANSCRIPTION FACTOR ELT-6 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATGCAGCTGGCAGGCACACATACATGCACGATCAATGCATGGGATCCTC
Internal bar code:ATTAAGGACGTTGCTCGAATTT

Confirmation - LEAP-Seq

LEAP-Seq distance:267
LEAP-Seq percent confirming:20.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:ATGCTTTGCCTCATCGAGCT
Suggested primer 2:TCCACCACATACCTGCAACC