Insertion junction: CLIP2.042713_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.042713
Chromosome:chromosome 12
Location:5769392
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g532650 (1 of 1) PTHR21394:SF0 - MAU2 CHROMATID COHESION FACTOR HOMOLOG intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGAGAGCACAAGGGAAACCATACGCGCAGGACAGTGTATGCGGTGCAGG
Internal bar code:TAGAATGCTCTGGAGTCAAGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:725
LEAP-Seq percent confirming:37.234
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:59
LEAP-Seq n unique pos:94

Suggested primers for confirmation by PCR

Suggested primer 1:AACGTCAAGCAATGCAGTGC
Suggested primer 2:GAGTGGTAGTGGTGGTGGTG