Insertion junction: CLIP2.042718_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.042718
Chromosome:chromosome 9
Location:1852023
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g397700 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGCCGCAATGGCCGCAGCCCCCAACTGGGCACTTTACATCAGCAGCCG
Internal bar code:AGTGACTAGAGAGTCCAGCTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1182
LEAP-Seq percent confirming:92.3077
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:CCGTCGTTCTCGAGTAGAGC
Suggested primer 2:GCATCACCACTGGCACAATC