Insertion junction: CLIP2.042725_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.042725
Chromosome:chromosome 17
Location:2508501
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g715700 VTC3,PPP44,PP2C5 (1 of 1) PF00481//PF07714 - Protein phosphatase 2C (PP2C) // Protein tyrosine kinase (Pkinase_Tyr); protein phosphatase 2C-like CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGCCTGCAGCAACTCTTGCCGCCCTTCGCGGTGTGCCCCGTCGACCTT
Internal bar code:TGGCTTCGCACCGTCTAAAGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1438
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GCCAGTGCGTGAAGTACTCT
Suggested primer 2:GAGGCTCGGAGCTCTCATTC