Insertion junction: CLIP2.042726_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.042726
Chromosome:chromosome 9
Location:96605
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g386400 FAP124,UBA1,POC20 (1 of 1) K03178 - ubiquitin-activating enzyme E1 (UBE1, UBA1); Ubiquitin E1 activating enzyme intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTGTCGGCACTGAAGCTATCCCGTGCCCCAACCGCGAACAAATGAAGAT
Internal bar code:TACAATATTTCTTGACAAATAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1367
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:TCACACGCTCACAGTAGCAG
Suggested primer 2:TGACGTCGTACACCGTGAAG