Insertion junction: CLIP2.042728_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.042728
Chromosome:chromosome 17
Location:6516383
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g744697 (1 of 726) IPR011009 - Protein kinase-like domain CDS/intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAACAAGTTGGTTGGGTTCTTAGGCGAGTCACCCAGCGCCCAGCTTGGGC
Internal bar code:GTAAGTCTAAACCGCCTGGACC

Confirmation - LEAP-Seq

LEAP-Seq distance:3306
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:55
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:55

Suggested primers for confirmation by PCR

Suggested primer 1:AGACCAACATGAAGCGGGAG
Suggested primer 2:CTCAGATCGTCACGACTCCG