Insertion junction: CLIP2.042730_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.042730
Chromosome:chromosome 6
Location:5667404
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g287900 (1 of 1) PF10067 - Predicted membrane protein (DUF2306) (DUF2306) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCACTTTAAGGTCCCACCCCGACACCTGGAGCTCACCAGCTGGTTGCGGG
Internal bar code:ACTCGAAAGAGTAGTCACACCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1990
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:56
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:56

Suggested primers for confirmation by PCR

Suggested primer 1:CGGTTTGCGTCCCTTGTTTT
Suggested primer 2:CAGTTCTCAAACAGTGGCGC