Insertion junction: CLIP2.042731_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.042731
Chromosome:chromosome 7
Location:3918662
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g339300 (1 of 3) PF05180 - DNL zinc finger (zf-DNL) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCCGTAGGGCCTTCCTTCTGCCACCTGGGGCGCACAGGGCACCCGGTTA
Internal bar code:TTACTAATTAACCTTTGGTTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:3536
LEAP-Seq percent confirming:45.977
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:47
LEAP-Seq n unique pos:87

Suggested primers for confirmation by PCR

Suggested primer 1:AGGAGACGTACCAGACCTCC
Suggested primer 2:GTTCCACGCAACAAACCCTC