Insertion junction: CLIP2.042731_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.042731
Chromosome:chromosome 7
Location:3918664
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g339300 (1 of 3) PF05180 - DNL zinc finger (zf-DNL) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGACCCCCCACGGCCTGACTCCTGCCTGAGCCGTTCGTTGTGCGCCTG
Internal bar code:GGGTCTTGTTGTAGACGAGGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:5000
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:81
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:81

Suggested primers for confirmation by PCR

Suggested primer 1:GTTCCACGCAACAAACCCTC
Suggested primer 2:AGGAGACGTACCAGACCTCC