Insertion junction: CLIP2.042732_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.042732
Chromosome:chromosome 1
Location:1331987
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g800023 (1 of 6) PTHR22870//PTHR22870:SF201 - REGULATOR OF CHROMOSOME CONDENSATION // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTCCCCCGGCTTGTCGCCGCGGTTAGCTCGGTCGTTCACGCCCAGACGG
Internal bar code:TTGTGACCGCTTGGATTTAAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1966
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:GAATGGATTGCGGTCGCTTC
Suggested primer 2:ACTTACCACTTCACCAGGCG