Insertion junction: CLIP2.042736_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.042736
Chromosome:chromosome 3
Location:2860648
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g162333 (1 of 3) IPR000104//IPR003439//IPR003593//IPR013525//IPR027417 - Antifreeze protein, type I // ABC transporter-like // AAA+ ATPase domain // ABC-2 type transporter // P-loop containing nucleoside triphosphate hydrolase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACGCCCTTAACACCCACATCAAACCACAACCCCTACGCCTCCTCTGCTC
Internal bar code:TATGATTGTAATCGAGATAGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:78
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:AGGGGAAGAAAACGCCTGAG
Suggested primer 2:CATGTGTGTGTGTGTGCCTG