Insertion junction: CLIP2.042741_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.042741
Chromosome:chromosome 14
Location:1234208
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g615950 Soluble ABC-E class cytosolic protein; (1 of 2) K03235 - elongation factor 3 (EF3, TEF3) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTATGCGGCCATGCCCAAACGTTCACACGCGACAATATCAAGTTAAACC
Internal bar code:ATTGGGTCGTATGTTACCACCA

Confirmation - LEAP-Seq

LEAP-Seq distance:66
LEAP-Seq percent confirming:5.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:19
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:ATCCTCCTGCTCATCCCACT
Suggested primer 2:GACCATCGCGACTCCGTTAT