Insertion junction: CLIP2.042746_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.042746
Chromosome:chromosome 12
Location:9258959
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g542650 (1 of 1) IPR000210//IPR011333//IPR013017 - BTB/POZ domain // POZ domain // NHL repeat, subgroup intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCCACCTCGATGCCCACCCAATAAGCAAACTCTTGCGGTTCCAGTCTGC
Internal bar code:TTCTGCTTATAAAATTCCATAT

Confirmation - LEAP-Seq

LEAP-Seq distance:549
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:CCACCAACCTATAGGACGGC
Suggested primer 2:CAAGGACGCATTCGCATGAG