Insertion junction: CLIP2.042748_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.042748
Chromosome:chromosome 3
Location:3420746
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g166800 (1 of 1) PTHR10877//PTHR10877:SF130 - POLYCYSTIN-RELATED // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCGGCGGTGCGCTGCTGCGCGCTGCTGCACGGCCACCTGGCACTGCAGG
Internal bar code:ATCGTCTGCGCTCTTTAGTAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1883
LEAP-Seq percent confirming:97.4359
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:GTACCTGTAGCAACGCCTGT
Suggested primer 2:TGCTGGTGCTGCAAATGTTC