Insertion junction: CLIP2.042749_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.042749
Chromosome:chromosome 10
Location:6231378
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g463150 DCI1 Enoyl-CoA hydratase/isomerase family; (1 of 1) PTHR11941//PTHR11941:SF43 - ENOYL-COA HYDRATASE-RELATED // DELTA(3,5)-DELTA(2,4)-DIENOYL-COA ISOMERASE, MITOCHONDRIAL intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTACGGCCTGTGACACGGCCTGTTTGTGACAAACGACGTGACGTCAGCA
Internal bar code:TTGGGATGATACTAATTATGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:509
LEAP-Seq percent confirming:35.7143
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:CAGTAGTGGCCCTGTGACTG
Suggested primer 2:GCAGGACAACCGTGAACAAC