Insertion junction: CLIP2.042749_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.042749
Chromosome:chromosome 10
Location:6231379
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g463150 DCI1 Enoyl-CoA hydratase/isomerase family; (1 of 1) PTHR11941//PTHR11941:SF43 - ENOYL-COA HYDRATASE-RELATED // DELTA(3,5)-DELTA(2,4)-DIENOYL-COA ISOMERASE, MITOCHONDRIAL intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTCCACGTAATGAAGGGTTGGGCCGCTCGCGTACTCTTACCCTAGGGAA
Internal bar code:TTGGGATGATACTAATTATGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2040
LEAP-Seq percent confirming:90.6977
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGGACAACCGTGAACAAC
Suggested primer 2:CAGTAGTGGCCCTGTGACTG