Insertion junction: CLIP2.042754_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.042754
Chromosome:chromosome 6
Location:2380378
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g268400 HFO9 (1 of 33) K11254 - histone H4 (H4); Histone H4 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAAAATGTCCGGACGTGGCAAGGGCGGCAAGGGCCTGGGCAAGGGCGGT
Internal bar code:CGTATTTGGAGACATATGGTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1621
LEAP-Seq percent confirming:92.6829
LEAP-Seq n confirming:76
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:82

Suggested primers for confirmation by PCR

Suggested primer 1:GGCACAGTAGGACCCAGAAC
Suggested primer 2:TCCTTGGGCATGATGGTCAC