Insertion junction: CLIP2.042757_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.042757
Chromosome:chromosome 3
Location:4965588
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g179300 SRH6 (1 of 1) K11367 - chromodomain-helicase-DNA-binding protein 1 [EC:3.6.4.12] (CHD1); SNF2-related DNA/RNA helicase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCAGCCGCTTCCCCACAGCAGAGGCCTTCGAGGCAGAGTACTCCCTGGA
Internal bar code:TATTCTAAGCTGTGTTTAGCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1278
LEAP-Seq percent confirming:91.1765
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:GCTCGCCGATGATGTTCAAC
Suggested primer 2:TATTGTCGGTGGTGGTCAGC