Insertion junction: CLIP2.042764_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.042764
Chromosome:chromosome 3
Location:5208453
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g181700 (1 of 6) IPR000719//IPR002290//IPR011009//IPR020636 - Protein kinase domain // Serine/threonine/dual specificity protein kinase, catalytic domain // Protein kinase-like domain // Calcium/calmodulin-dependent/calcium-dependent protein kinase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACATCATTCGCGTCGCTGCCTGCAAGTTGCCGTTAAGCTAAAGGATTTG
Internal bar code:TTGCATGCGCATCCCCCCCTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:515
LEAP-Seq percent confirming:9.09091
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:AAGGCTCCTTCATCATGGGC
Suggested primer 2:GAACCAGGGGTCCTTCATGG