Insertion junction: CLIP2.042766_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.042766
Chromosome:chromosome 10
Location:1113276
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g425400 (1 of 41) PTHR32523//PTHR32523:SF8 - FAMILY NOT NAMED // PHYTOL KINASE 1, CHLOROPLASTIC intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATGGGGTCTGTGTGTTCGTCCCCTCTCCTGATTGTTTCTGCCGTGCCGT
Internal bar code:TTAACGGCGGGCCGCCTCTTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:4037
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:79
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:79

Suggested primers for confirmation by PCR

Suggested primer 1:GCTCCTGCTCTTCACAACCT
Suggested primer 2:TCGAGGCTGCTTTGTGACAA