Insertion junction: CLIP2.042767_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.042767
Chromosome:chromosome 16
Location:2693204
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g661700 (1 of 1) PTHR31775//PTHR31775:SF2 - FAMILY NOT NAMED // REMORIN CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCCTCCACCAGGGTGCCGCAGTACGACTCCAGCCGCTATGCAGCAGGTA
Internal bar code:GCGGTAGGATGTCGCCGTAATA

Confirmation - LEAP-Seq

LEAP-Seq distance:3271
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:53
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:53

Suggested primers for confirmation by PCR

Suggested primer 1:CAACAAAGGGGCTTGTCGTG
Suggested primer 2:ACCACACAACTCACTGCCAA