Insertion junction: CLIP2.042772_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.042772
Chromosome:chromosome 3
Location:3380589
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g166500 (1 of 2) IPR000104//IPR013083 - Antifreeze protein, type I // Zinc finger, RING/FYVE/PHD-type CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGAAGGTGCTCCGCTGATGAGGTGCACGTCCAGCAGTGCCAGCTCTTGC
Internal bar code:AGTGTACTACTTTCAACATTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2336
LEAP-Seq percent confirming:98.0392
LEAP-Seq n confirming:50
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:51

Suggested primers for confirmation by PCR

Suggested primer 1:TACGCCTGGTATCGAAAGCC
Suggested primer 2:ATCAGTGCTGAAGGACAGGC