Insertion junction: CLIP2.042774_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.042774
Chromosome:chromosome 4
Location:1238873
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g215150 SSS1B,SSS1,SSIb (1 of 1) IPR023159 - SO1590-like domain; Soluble starch synthase IB intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGGGAATGCAGAGGTGGTGCGGGTGGGGTGAAACGGATGGGAGCGGAGC
Internal bar code:ATTGCAAGAGTTACAGTCGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:504
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:AAGTAGCCCACCTGTTGTCG
Suggested primer 2:GCAAGGCGTATGCTAACAGC