Insertion junction: CLIP2.042775_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.042775
Chromosome:chromosome 16
Location:7238564
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g677205 (1 of 4) PF00207 - Alpha-2-macroglobulin family (A2M) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCGGAGTAGACCAGGCCCACGTTGGACAGCGTCAGGCGGCCCAGGTTGG
Internal bar code:GTTTATAAATTAAGAATTGAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3320
LEAP-Seq percent confirming:34.5238
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:55
LEAP-Seq n unique pos:84

Suggested primers for confirmation by PCR

Suggested primer 1:CGCTGGTATTTGATGCGGTG
Suggested primer 2:ATGTGCTTGTGGTTTGCGAC