Insertion junction: CLIP2.042779_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.042779
Chromosome:chromosome 4
Location:4050450
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g232802 (1 of 70) 3.1.3.16 - Protein-serine/threonine phosphatase / Serine/threonine specific protein phosphatase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAACGCTACCAGAATATTTGATCCACAGTGGCCGCCGCTGGCTCCCACG
Internal bar code:TCAGTTCGCGCGGTGGCGGCCC

Confirmation - LEAP-Seq

LEAP-Seq distance:468
LEAP-Seq percent confirming:55.2632
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:34
LEAP-Seq n unique pos:76

Suggested primers for confirmation by PCR

Suggested primer 1:GACCCGGACTTCAAGGTCAG
Suggested primer 2:GCAGCTGTGGCATCAATACG