Insertion junction: CLIP2.042782_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.042782
Chromosome:chromosome 12
Location:2499882
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g507200 (1 of 2) IPR000104//IPR003613 - Antifreeze protein, type I // U box domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTGCGACATTACAAAGCGGAATTATCTCGGCATGCTTGCTCAGGTCCAG
Internal bar code:AAGGTAAAGGAACCTCTGGCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:198
LEAP-Seq percent confirming:3.84615
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:50
LEAP-Seq n unique pos:52

Suggested primers for confirmation by PCR

Suggested primer 1:ACTCGGCGTGAAAGTTACGT
Suggested primer 2:GTCTCCTAGAAACCCTCGCG