Insertion junction: CLIP2.042786_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.042786
Chromosome:chromosome 3
Location:4535462
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g176000 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGATACATTCTCTGGAGCCAGTGGTTGCTCAATCACGGACCTATTTTCC
Internal bar code:TAAATAAGCCTTGTTAGCTCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:3914
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:67
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:67

Suggested primers for confirmation by PCR

Suggested primer 1:GGAGGTGCTTAGCCGGTTAA
Suggested primer 2:CCTGAGTCAGCACCTTAGGC