Insertion junction: CLIP2.042787_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.042787
Chromosome:chromosome 6
Location:7906990
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g304000 SRH14 (1 of 1) PTHR10799:SF580 - INTEGRATOR COMPLEX SUBUNIT 10-LIKE PROTEIN; SNF2-related DNA/RNA helicase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAAGCGGAGACGCGGAGGTGCCGCTCCTGCAGATGCGGATGCTGCGGGG
Internal bar code:CTTATTTATTGTTCTACAGTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1249
LEAP-Seq percent confirming:84.0
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:GATCCTCCCCATGCCTTTCC
Suggested primer 2:AGGGCATGTGTGTATGGGTG