Insertion junction: CLIP2.042790_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.042790
Chromosome:chromosome 16
Location:5511690
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g682350 (1 of 1) PTHR11685:SF154 - E3 UBIQUITIN-PROTEIN LIGASE ARI5-RELATED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACGCGTGCGACATAAGCAGTCAGGTGATGACTTCAGTGACCAAAGCCAG
Internal bar code:TTGCGAGTAATGAACTGTCTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:3885
LEAP-Seq percent confirming:98.5075
LEAP-Seq n confirming:66
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:67

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGTCCAAGTACAGCACCT
Suggested primer 2:TCTTCACCGTCTTGCAGGAC