Insertion junction: CLIP2.042799_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.042799
Chromosome:chromosome 7
Location:800850
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g318050 (1 of 10) PF00170 - bZIP transcription factor (bZIP_1) outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAAGTATTTCGGCTATGTCCGGGCAATGAGGTAGTTCGAACTCAGAGAGT
Internal bar code:TCGTTCTGGAAAGCGGGGAGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:4661
LEAP-Seq percent confirming:92.5926
LEAP-Seq n confirming:50
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:54

Suggested primers for confirmation by PCR

Suggested primer 1:ATGGGGAGTACGGTAGTGCT
Suggested primer 2:CAAGGACTGCCAGTTTGCAC