Insertion junction: CLIP2.042800_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.042800
Chromosome:chromosome 12
Location:3493780
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g496950 (1 of 1) 3.4.13.5 - Xaa-methyl-His dipeptidase / X-methyl-His dipeptidase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATTGGTGCATGCTACGTCCGTGCTACAGGTGCGCCACCCAAGCCCAATA
Internal bar code:TTTTAAAGGGCTCTTGTCTCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:3899
LEAP-Seq percent confirming:68.1818
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:GTTCACCAGTTCAAACGCCC
Suggested primer 2:GCGCCCTCAGCATAGTAGAG