Insertion junction: CLIP2.042802_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.042802
Chromosome:chromosome 16
Location:2980618
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g663700 (1 of 1) K03871 - von Hippel-Lindau disease tumor supressor (VHL) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGGCTGGTGAGTCCGAGGCCTGCGACTGCCGCGCTCCGCGACCCTGTGC
Internal bar code:TGAGGCGATGGCATGCGCTTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2651
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:88
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:88

Suggested primers for confirmation by PCR

Suggested primer 1:GTGGACCGTTGACACGTTTG
Suggested primer 2:AAGTATGGACGCAAGCTGCT