Insertion junction: CLIP2.042803_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.042803
Chromosome:chromosome 14
Location:430128
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g610647 (1 of 3) PF02209 - Villin headpiece domain (VHP) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGCGGGCAGGCTGCTCGTTGGATGGGGAGGGGCAGGCCAGCAGACACG
Internal bar code:ATACAACTGTTGATGAATCGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:455
LEAP-Seq percent confirming:60.8696
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:AGCAGTTGTGGACCGAGATG
Suggested primer 2:GTGGCTAAGGTTGGCTAGCA