Insertion junction: CLIP2.042804_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.042804
Chromosome:chromosome 2
Location:4933984
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g110150 (1 of 1) PF00651//PF03110//PF07707 - BTB/POZ domain (BTB) // SBP domain (SBP) // BTB And C-terminal Kelch (BACK) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACGTTCCCTACACTGCTCAAGTACTGCACTGCAACGTTTGCGGGACGGT
Internal bar code:GTGCCTAGCGTCTGCTTACATT

Confirmation - LEAP-Seq

LEAP-Seq distance:1419
LEAP-Seq percent confirming:60.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:CCAGGCTCTCCTTCTTGTGG
Suggested primer 2:GCAAACTTTCTGCTGCACGA