Insertion junction: CLIP2.042807_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.042807
Chromosome:chromosome 3
Location:5981472
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g189350 (1 of 1) PTHR36352:SF1 - EXPRESSED PROTEIN CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGAACTGCCAAGCTGCCTGGGTGCGGATGTAACACAGGGCGCGCTTAAG
Internal bar code:CAACTACTACTTCGCGTTCATT

Confirmation - LEAP-Seq

LEAP-Seq distance:2891
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:TCTTCGTACACGTCACCAGC
Suggested primer 2:GCCATGACAGAGAAAGCCCT