Insertion junction: CLIP2.042812_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.042812
Chromosome:chromosome 13
Location:5060602
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g606600 CGK1 cGMP-dependent protein kinase; (1 of 6) K07376 - protein kinase, cGMP-dependent (PRKG) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAAGCTCAACAAGGGCTACGGCGTCACGGCGGACCTGTGGAGCGCAGGC
Internal bar code:ATCTTGATTGTACAGTCAAGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:3558
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:62
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:62

Suggested primers for confirmation by PCR

Suggested primer 1:TGAAAGACTGCGGCTGAGTT
Suggested primer 2:TTTACCCTGTCGCTGCGATT