Insertion junction: CLIP2.042812_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.042812
Chromosome:chromosome 13
Location:5060605
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g606600 CGK1 cGMP-dependent protein kinase; (1 of 6) K07376 - protein kinase, cGMP-dependent (PRKG) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGAGGTCGTGCCGAACGCCCACACCTCAGGCGCCTGCAAATCCCATATA
Internal bar code:ATCTTGATTGTACAGTCAAGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1011
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:TTTACCCTGTCGCTGCGATT
Suggested primer 2:TGAAAGACTGCGGCTGAGTT