Insertion junction: CLIP2.042822_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.042822
Chromosome:chromosome 6
Location:3735084
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278162 PHC3 (1 of 24) IPR003882//IPR024616 - Pistil-specific extensin-like protein // Pherophorin; Pherophorin-chlamydomonas homolog 3 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTGAGAGGTTGGAAAAATGCGTGGTTAATACCAGAACTACTCGGCATGC
Internal bar code:GACGTGTTTCTCACCCGAGTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:445
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:GTACGCCCTGTTCAACTCCA
Suggested primer 2:GCGAGGCTGGAGATACTGAC