Insertion junction: CLIP2.042826_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.042826
Chromosome:chromosome 11
Location:4269884
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g482101 (1 of 2) IPR016024//IPR019399 - Armadillo-type fold // Parkin co-regulated protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCTAGTAGACAGGCGGATCAGCCGGATTGCCCGACCGCCTCGCCCCACC
Internal bar code:GGCTATCCCATATGTGCGTCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:281
LEAP-Seq percent confirming:55.5556
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:TTGAATGGCATGCAACTCGC
Suggested primer 2:CCTGCCCTGTGTGTATGTGT