Insertion junction: CLIP2.042826_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.042826
Chromosome:chromosome 11
Location:4269884
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g482101 (1 of 2) IPR016024//IPR019399 - Armadillo-type fold // Parkin co-regulated protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTATGTGAGCTGCAGGGAGGCACCAACGGCCCGAGCCGCCCTGCCGCAG
Internal bar code:GGCTATCCCATATGTGCGTCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:170
LEAP-Seq percent confirming:94.1176
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:CCTGCCCTGTGTGTATGTGT
Suggested primer 2:TTGAATGGCATGCAACTCGC