Insertion junction: CLIP2.042828_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.042828
Chromosome:chromosome 17
Location:2776828
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g718000 PHC7,PHC6 (1 of 24) IPR003882//IPR024616 - Pistil-specific extensin-like protein // Pherophorin; Pherophorin-chlamydomonas homolog 7 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGAGGGCACAATATGGGGGCAACCGCAACGGCTTGGCTGGTCATACCGC
Internal bar code:CGGGGCACGAGTGGCGATATAT

Confirmation - LEAP-Seq

LEAP-Seq distance:646
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:CGTGTTGTCCGTGACCAGTA
Suggested primer 2:GTGTCGTACAGGACCAAGCA