Insertion junction: CLIP2.042833_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.042833
Chromosome:chromosome 13
Location:4253637
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g592000 (1 of 19) K08850 - aurora kinase, other [EC:2.7.11.1] (AURKX) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGGCCATGCGCCAAATGACTCGTCGGTTGTGCCTCCTGCGGTCGCGCAT
Internal bar code:GGTCACTGGTTGGATATGTTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:531
LEAP-Seq percent confirming:31.25
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:CAACTGTGTTGTGGTCTGCG
Suggested primer 2:CGATCGGGTGCAGTCGATTA