Insertion junction: CLIP2.042837_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.042837
Chromosome:chromosome 3
Location:1342289
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g150650 (1 of 2) PTHR12775:SF0 - PROTEIN RTF2 HOMOLOG CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGCGTACATCTCCAGGTAGCAGGAGCGCGACTCCGCCCCAGTAGAGCCA
Internal bar code:TTCAAAAAGTAAAAAGATCTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1605
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:ACCTCGCCTGTTAGTTGAGC
Suggested primer 2:CAGTCCACCTCATCAACCCC