Insertion junction: CLIP2.042842_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.042842
Chromosome:chromosome 10
Location:4744702
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g452500 (1 of 1) PTHR12202//PTHR12202:SF0 - UNCHARACTERIZED // PROTEIN F58B3.4 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAAGAGTGTGAGCACTGGACGAGAGTCGAGAGGTGCTCAATGCAAGAGAG
Internal bar code:GGTTAGCCTTTAGGTTTCTTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1800
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:CAACGTGAATGCATAGGCCG
Suggested primer 2:CAAACCTGTTCCTGTGTGCG