Insertion junction: CLIP2.042843_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.042843
Chromosome:chromosome 16
Location:6229808
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00152018

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAAAGATCCCTCCGGCCGCCGCACATCAGACGTTAGGCATGTGCAGCATG
Internal bar code:ATGTTACTAAAATAGGTTTGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2325
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:TATTAGGTTACGCGGCGGAC
Suggested primer 2:GCGTTCATTCATCGGACACG