Insertion junction: CLIP2.042853_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.042853
Chromosome:chromosome 17
Location:3350417
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g722900 (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGTGGTGCAGCAGGCAACCATGATGGTCGAGAGCGAGGAGGCGCAGTAC
Internal bar code:GTGGGTATTCAGCTGATGGGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2386
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:TCACGTAGGGGTGCATGTTC
Suggested primer 2:GTGACGCCTCACCTTCAAGT